Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX507325: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318383' containing sample 'VET0440R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 766.1M bases, 358.1Mb downloads

UUID: 013d94c3-8e95-4ff0-8ad5-cb34e8a5d904

Design: Illumina sequencing of Staphylococcus aureus VET0440R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228755 • SRP045039 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0440R

SAMN02404245 • SRS586277 • All experiments • All runs

Organism: Staphylococcus aureus VET0440R

Library:

Name: Pond-318383

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470112.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8TR

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55183

research_project: RP-513

root_sample_id: SM-4PMWB

sample_id: SM-5C8TR

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 766.1M bases, 358.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1213113	1,892,048	382.2M	178.8Mb	2014-04-02
SRR1531029	1,900,545	383.9M	179.3Mb	2014-07-28

ID:: 706629

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